Commonly used intracellular immunohistochemical stains

StainTarget / Normal CellsKey Tumor / Disease Association
CytokeratinEpithelial cells tCarcinoma (e.g., Squamous cell, Adenocarcinoma)
VimentinMesenchymal cells (fibroblasts)Sarcoma, Meningioma, Endometrial CA, RCC
DesminMuscle cells tRhabdomyosarcoma, Leiomyosarcoma
GFAPGlial cells (Astrocytes)Astrocytoma, Glioblastoma
NeurofilamentNeuronsNeuroblastoma, Pheochromocytoma
S-100Neural crest cells tMelanoma, Schwannoma, Langerhans cell histiocytosis
HMB-45Melanocytes tMelanoma (More specific than S-100)
Chromogranin, SynaptophysinNeuroendocrine cells tSmall Cell Lung Cancer, Carcinoid, Pheochromocytoma
CalretininMesotheliumMesothelioma t (distinguishes from lung adenocarcinoma)
CD31 / vWFVascular endotheliumAngiosarcoma, Kaposi Sarcoma, Hemangioma
CD45 (LCA)LeukocytesLymphoma, Leukemia (general screen)
CD3T-cellsT-cell Lymphoma, T-ALL
TRAPOsteoclasts / B-cellsHairy Cell Leukemia

*Intermediate filaments (cytoskeletal structural components).

Intermediate filaments

  • Functions: maintain cell structure
  • Examples: cytokeratin (in epithelial cells), vimentin (in fibroblasts), desmin (in muscle fibers), glial fibrillary acid proteins (GFAP, in glial cells), neurofilaments (in nerve cells), nestin (in neuronal stem cells), lamins (in cell nucleus)

Microtubules


Accessory protein

  • Microtubule-associated proteins (MAPs) such as tau protein
  • Microtubule motor proteins: a class of ATPase proteins converting the energy derived from the hydrolysis of ATP into mechanical energy for movement of cells/organelles.
    • Kinesin: anterograde transport of vesicles from the (‑) to the (+) ends of microtubules
      • Kinesin is used by Herpes simplex virus to travel from sensory neurons to epithelial tissues, leading to virus reactivation from latency
    • Dynein: retrograde transport of vesicles from the (+) to the (‑) ends of microtubules
      • Dynein is used by Clostridium tetani, herpes simplex virus, poliovirus, and rabies virus for transport from the axon terminal to the neuronal cell body.
      • Axonemal dynein: special dynein that links the peripheral 9 tubulin dimers of the axonem, which causes the cilia and flagella to bend

Mnemonic

Kin (keen) to go out (anterograde), Dying to come back home (retrograde). t